Representing Australia for the first time in 5 years, Dokić received a wild card into the
ASB Classic in Auckland in January. She lost her first round match to
Julia Schruff, 5-7 7-6
(3) 6-1, hitting 51 unforced errors and 28 double faults. Dokić then earned a wildcard berth at the
2006 Australian Open. She held a match point on her opponent
Virginie Razzano's serve, and hit what she thought was a forehand winner, only to have the umpire overrule the ball out. She went on to lose the match, 3-6 7-6
(6) 6-1, hitting over 70 unforced errors.
Dokić didn't play again until
April 10. After 3 months away from the game, she was beaten 7-5 7-5 by 18-year-old, 709th ranked Eleonora Punzo in the first qualifying round at the
ITF circuit tournament (the level below the WTA tour) in
Biarritz, France.
In May, the media reported that she was training in the
Iva Majoli tennis academy.
In June, Dokić turned down a wild card in Zagreb and instead played in the qualifying rounds of the $25K event in Gorizia. She beat the sixteenth seed Michaela Johansson, Giulia Gatto-Monticone, and world number 325 Olga Panova. She then won her first round match against Maria-Vanina Garcia-Sokol, before losing to Romanian Madalina-Victorita Gojnea.
Later that month, Dokić played at the
2006 Wimbledon Championships. She gained entry into the qualifying draw via a wild-card entry, due to her past successes. However, she was defeated in the first qualifying round 4-6 7-6
(4) 6-2 by
Alexandra Stevenson after serving for the match at 6-4 5-4. She then declined a main-draw wild card in Martina Franca, Italy, and pulled out of tournaments in Hechingen, Germany, and Rimini, Italy.
Under the guidance of new coach
Nikola Pilić, after over 3 months away from the tour due to injury, Dokić qualified for a $10K tournament defeating Mika Urbancic and
Lynn Blau. In the main draw, she advanced to the semifinals, losing to Astrid Besser of Italy 3-6 6-3 7-6
(5), who went on to win the final.